CATHAI (cluster analysis tool for healthcare-associated infections) is an interactive web-based visualization platform that couples WGS informed clustering with associated metadata, thereby converting sequencing data into informative and accessible clinical information for the management of healthcare-associated infections (HAI) and nosocomial outbreaks.
All code associated with this application are free available from CATHAI’s github. A demonstration version of CATHAI is available online at cathai.fordelab.com.
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Figure:Clustering of clinical Enterococcus faecium isolates. CATHAI interface consists of three linked panels—an epidemic curve (A), clustering plot (B) and control panel (C).