FordeGenomics

Microbial Genomics | Bioinformatics | Genomic Epidemiology

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CATHAI: Cluster analysis tool for healthcare-associated infections

CATHAI (cluster analysis tool for healthcare-associated infections) is an interactive web-based visualization platform that couples WGS informed clustering with associated metadata, thereby converting sequencing data into informative and accessible clinical information for the management of healthcare-associated infections (HAI) and nosocomial outbreaks.

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GraphSNP: An interactive distance viewer for investigating outbreaks and transmission networks using a graph approach

GraphSNP is an interactive visualisation tool running in a web browser that allows users to rapidly generate pairwise SNP distance networks, investigate SNP distance distributions, identify clusters of related organisms, and reconstruct transmission routes.

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HAIviz: An interactive healthcare-associated infection visualisation tool for integrating and communicating genomic epidemiological information of local outbreaks

HAIviz is a single page visualization application designed to help infection control professionals to interactively visualize, integrate, and communicate information related with genomic epidemiological investigation at the local setting, such as hospital and other healthcare settings.

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